Pseudomonas syringae pv. syringae B728a, Psyr_5030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_5030
Name
Replicon chromosome
Genomic location 5969404 - 5969964 (+ strand)

Cross-References

RefSeq YP_238095.1
GI 66048254
Entrez 3370588
INSDC AAY40057.1
NCBI Locus Tag Psyr_5030
UniParc UPI000050DBC3
UniProtKB Acc Q4ZLB5
UniProtKB ID UBIC_PSEU2
UniRef100 UniRef100_Q4ZLB5
UniRef50 UniRef50_Q9HTK1
UniRef90 UniRef90_Q4ZLB5

Product

Feature Type CDS
Coding Frame 1
Product Name
chorismate lyase
Synonyms
Evidence for Translation
Charge (pH 7) -9.37
Kyte-Doolittle Hydrophobicity Value -0.191
Molecular Weight (kDa) 20.9
Isoelectric Point (pI) 4.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 99 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004922 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_5030
Search term: chorismate lyase

Human Homologs

References

No references are associated with this feature.