Pseudomonas aeruginosa UCBPP-PA14, PA14_19290

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_19290
Name
Replicon	chromosome
Genomic location	1662267 - 1663607 (+ strand)
Transposon Mutants in orthologs	2 transposon mutants in orthologs

Cross-References

RefSeq	YP_789681.1
GI	116051486
Entrez	4381432
INSDC	ABJ12722.1
NCBI Locus Tag	PA14_19290
UniParc	UPI0000E44973
UniProtKB Acc	Q02QV5
UniProtKB ID	Q02QV5_PSEAB
UniRef100	UniRef100_S0HS65
UniRef50	UniRef50_A0A098FQD5
UniRef90	UniRef90_B7UWL4

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP-dependent RNA helicase
Synonyms
Evidence for Translation
Charge (pH 7)	21.09
Kyte-Doolittle Hydrophobicity Value	-0.313
Molecular Weight (kDa)	49.0
Isoelectric Point (pI)	10.49

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 646 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002174 (538 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_19290 Search term: ATP-dependent RNA helicase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000463561 DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676] E-value: 2.9e-59 Percent Identity: 37.3
Ensembl 110, assembly GRCh38.p14	ENSP00000464050 DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676] E-value: 2.9e-59 Percent Identity: 37.3
Ensembl 110, assembly GRCh38.p14	ENSP00000352308 DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676] E-value: 2.9e-59 Percent Identity: 37.3
Ensembl 110, assembly GRCh38.p14	ENSP00000374574 DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676] E-value: 2.9e-59 Percent Identity: 37.3

References