Pseudomonas aeruginosa UCBPP-PA14, PA14_24060 (xcpW)

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_24060
Name	xcpW
Replicon	chromosome
Genomic location	2088952 - 2089665 (+ strand)
Transposon Mutants	1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	5 transposon mutants in orthologs

Cross-References

RefSeq	YP_790075.1
GI	116051094
Entrez	4381098
INSDC	ABJ12330.1
NCBI Locus Tag	PA14_24060
UniParc	UPI000012BC5A
UniProtKB Acc	Q02PR1
UniProtKB ID	Q02PR1_PSEAB
UniRef100	UniRef100_Q00517
UniRef50	UniRef50_Q00517
UniRef90	UniRef90_Q00517

Product

Feature Type	CDS
Coding Frame	1
Product Name	general secretion pathway protein J
Synonyms
Evidence for Translation
Charge (pH 7)	-6.03
Kyte-Doolittle Hydrophobicity Value	-0.685
Molecular Weight (kDa)	27.1
Isoelectric Point (pI)	5.08

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
6UTU	PROTEIN TRANSPORT	10/30/19	Crystal structure of minor pseudopilin ternary complex of XcpVWX from the Type 2 secretion system of Pseudomonas aeruginosa in the P3 space group	Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)	2.85	X-RAY DIFFRACTION	100.0
5VTM	TRANSPORT PROTEIN	05/17/17	The crystal structure of minor pseudopilin ternary complex of XcpVWX from the Type 2 secretion system of Pseudomonas aeruginosa	Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)	2.041	X-RAY DIFFRACTION	100.0
5BW0	PROTEIN TRANSPORT	06/05/15	The crystal structure of minor pseudopilin binary complex of XcpV and XcpW from the Type 2 secretion system of Pseudomonas aeruginosa	Pseudomonas aeruginosa	2	X-RAY DIFFRACTION	100.0
3NJE	PROTEIN TRANSPORT	06/17/10	Structure of the Minor Pseudopilin XcpW from the Pseudomonas aeruginosa Type II Secretion System	Pseudomonas aeruginosa	1.85	X-RAY DIFFRACTION	100.0

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 72 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000656 (743 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_24060 Search term: xcpW Search term: general secretion pathway protein J

Human Homologs

References