Pseudomonas aeruginosa UCBPP-PA14, PA14_25230 (mfd)

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_25230
Name	mfd
Replicon	chromosome
Genomic location	2205023 - 2208469 (- strand)
Transposon Mutants	2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	5 transposon mutants in orthologs

Cross-References

RefSeq	YP_790170.1
GI	116051004
Entrez	4381028
INSDC	ABJ12240.1
NCBI Locus Tag	PA14_25230
UniParc	UPI0000395F72
UniProtKB Acc	Q02PG6
UniProtKB ID	Q02PG6_PSEAB
UniRef100	UniRef100_Q02PG6
UniRef50	UniRef50_Q4KFB0
UniRef90	UniRef90_Q9HZK3

Product

Feature Type	CDS
Coding Frame	1
Product Name	transcription-repair coupling factor
Synonyms
Evidence for Translation
Charge (pH 7)	-18.30
Kyte-Doolittle Hydrophobicity Value	-0.184
Molecular Weight (kDa)	128.8
Isoelectric Point (pI)	5.71

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 630 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002580 (531 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_25230 Search term: mfd Search term: transcription-repair coupling factor

Human Homologs

References