Pseudomonas aeruginosa UCBPP-PA14, PA14_70560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_70560
Name
Replicon chromosome
Genomic location 6284966 - 6285898 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14

Cross-References

RefSeq YP_793818.1
GI 116053491
Entrez 4385244
INSDC ABJ14727.1
NCBI Locus Tag PA14_70560
UniParc UPI00000C5FB4
UniProtKB Acc Q02E18
UniProtKB ID Q02E18_PSEAB
UniRef100 UniRef100_W0Z0C0
UniRef50 UniRef50_Q4K3Q5
UniRef90 UniRef90_Q4K3Q5

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.47
Kyte-Doolittle Hydrophobicity Value -0.023
Molecular Weight (kDa) 34.3
Isoelectric Point (pI) 6.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4Y0M DNA BINDING PROTEIN 02/06/15 The reduced form of OxyR regulatory domain from Psedomonas aeruginosa Pseudomonas aeruginosa PAO1 2.3 X-RAY DIFFRACTION 100.0
4X6G DNA BINDING PROTEIN 12/08/14 Full-length OxyR C199D from pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 2 X-RAY DIFFRACTION 99.7
4XWS DNA BINDING PROTEIN 01/29/15 OxyR regulatory domain C199D mutant from pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 3.006 X-RAY DIFFRACTION 99.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 540 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004912 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_70560

Human Homologs

References

No references are associated with this feature.