Pseudomonas aeruginosa UCBPP-PA14, PA14_72780 (pdxY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_72780
Name
pdxY
Replicon chromosome
Genomic location 6481814 - 6482680 (+ strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 4 transposon mutants in orthologs

Cross-References

RefSeq YP_793993.1
GI 116053666
EC Number 2.7.1.35
Entrez 4382376
INSDC ABJ14902.1
NCBI Locus Tag PA14_72780
UniParc UPI0000396BA2
UniProtKB Acc Q02DJ3
UniProtKB ID PDXY_PSEAB
UniRef100 UniRef100_Q02DJ3
UniRef50 UniRef50_P77150
UniRef90 UniRef90_Q9HT57

Product

Feature Type CDS
Coding Frame 1
Product Name
pyridoxamine kinase
Synonyms
Evidence for Translation
Charge (pH 7) -6.05
Kyte-Doolittle Hydrophobicity Value 0.120
Molecular Weight (kDa) 31.2
Isoelectric Point (pI) 5.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5B6A TRANSFERASE 05/25/16 Structure of Pyridoxal Kinasefrom Pseudomonas Aeruginosa Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) 2 X-RAY DIFFRACTION 99.3

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 138 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005054 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_72780
Search term: pdxY

Human Homologs

Ensembl 110, assembly GRCh38.p14
pyridoxal kinase [Source:HGNC Symbol;Acc:HGNC:8819]
E-value: 7.4e-32
Percent Identity: 28.3

References

No references are associated with this feature.