Pseudomonas aeruginosa M18, PAM18_0428
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_0428
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 471410 - 473329 (- strand) |
Cross-References
| RefSeq | YP_005973019.1 |
| GI | 386056497 |
| Entrez | 12564446 |
| NCBI Locus Tag | PAM18_0428 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative ATP-dependent RNA helicase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 29.11 |
| Kyte-Doolittle Hydrophobicity Value | -0.819 |
| Molecular Weight (kDa) | 70.1 |
| Isoelectric Point (pI) | 10.65 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000419 (542 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_0428
Search term: putative ATP-dependent RNA helicase
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value:
2.9e-65
Percent Identity:
43.6
|
References
No references are associated with this feature.