Pseudomonas aeruginosa M18, PAM18_0724 (phzD1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_0724
|
| Name |
phzD1
|
| Replicon | chromosome |
| Genomic location | 792505 - 793128 (- strand) |
Cross-References
| RefSeq | YP_005973315.1 |
| GI | 386056793 |
| Entrez | 12564753 |
| NCBI Locus Tag | PAM18_0724 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
phenazine biosynthesis protein PhzD
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -1.90 |
| Kyte-Doolittle Hydrophobicity Value | -0.096 |
| Molecular Weight (kDa) | 23.2 |
| Isoelectric Point (pI) | 6.35 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 1NF9 | HYDROLASE | 12/13/02 | Crystal Structure of PhzD protein from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.5 | X-RAY DIFFRACTION | 99.5 |
| 1NF8 | HYDROLASE | 12/13/02 | Crystal structure of PhzD protein active site mutant with substrate | Pseudomonas aeruginosa | 1.6 | X-RAY DIFFRACTION | 99.0 |
Drugs Targeting this Protein
Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.
| Drug Name | Source Accession | Source DB | Version | Target Accession | Target Description | Percent Identity | Alignment Length | E-Value |
| Isochorismic Acid | DB02793 | DrugBank | 5.1.4 | Q7DC80 | Phenazine biosynthesis protein PhzD | 99.5 | 207 | 1.0e-115 |
| Formic acid | DB01942 | DrugBank | 5.1.4 | Q7DC80 | Phenazine biosynthesis protein PhzD | 99.5 | 207 | 1.0e-115 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 223 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001494 (1079 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_0724
Search term: phzD1
Search term: phenazine biosynthesis protein PhzD
|
Human Homologs
References
No references are associated with this feature.