Pseudomonas aeruginosa M18, PAM18_1582 (amrZ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_1582
|
| Name |
amrZ
|
| Replicon | chromosome |
| Genomic location | 1734893 - 1735219 (- strand) |
Cross-References
| RefSeq | YP_005974171.1 |
| GI | 386057649 |
| Entrez | 12565612 |
| NCBI Locus Tag | PAM18_1582 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
alginate and motility regulator Z
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.19 |
| Kyte-Doolittle Hydrophobicity Value | -0.534 |
| Molecular Weight (kDa) | 12.3 |
| Isoelectric Point (pI) | 7.93 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3QOQ | Transcription/DNA | 02/10/11 | Crystal Structure of the Transcription Factor AmrZ in Complex with the 18 Base Pair amrZ1 Binding Site | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 3.1 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002243 (527 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_1582
Search term: amrZ
Search term: alginate and motility regulator Z
|
Human Homologs
References
No references are associated with this feature.