Pseudomonas aeruginosa M18, PAM18_2012
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_2012
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2208845 - 2209792 (- strand) |
Cross-References
| RefSeq | YP_005974600.1 |
| GI | 386058078 |
| Entrez | 12566054 |
| NCBI Locus Tag | PAM18_2012 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative lipase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.10 |
| Kyte-Doolittle Hydrophobicity Value | -0.028 |
| Molecular Weight (kDa) | 34850.8 |
| Isoelectric Point (pI) | 6.52 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6I8W | HYDROLASE | 11/21/18 | Crystal structure of a membrane phospholipase A, a novel bacterial virulence factor | Pseudomonas aeruginosa | 2 | X-RAY DIFFRACTION | 99.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 503 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000798 (2691 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_2012
Search term: putative lipase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
epoxide hydrolase 3 [Source:HGNC Symbol;Acc:HGNC:23760]
E-value:
9.0e-15
Percent Identity:
24.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
epoxide hydrolase 3 [Source:HGNC Symbol;Acc:HGNC:23760]
E-value:
9.0e-15
Percent Identity:
24.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
epoxide hydrolase 3 [Source:HGNC Symbol;Acc:HGNC:23760]
E-value:
9.0e-15
Percent Identity:
24.8
|
References
No references are associated with this feature.