Pseudomonas aeruginosa M18, PAM18_4075
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_4075
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4510125 - 4510595 (+ strand) |
Cross-References
| RefSeq | YP_005976658.1 |
| GI | 386060136 |
| Entrez | 12568131 |
| NCBI Locus Tag | PAM18_4075 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative dna-binding stress protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.04 |
| Kyte-Doolittle Hydrophobicity Value | -0.123 |
| Molecular Weight (kDa) | 17.5 |
| Isoelectric Point (pI) | 4.70 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 8FF9 | METAL BINDING PROTEIN | 12/08/22 | Crystal structure of Apo Dps protein (PA0962) from Pseudomonas aeruginosa (orthorhombic form) | Pseudomonas aeruginosa | 1.7 | X-RAY DIFFRACTION | 100.0 |
| 8FFA | METAL BINDING PROTEIN | 12/08/22 | Crystal structure of Apo Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form) | Pseudomonas aeruginosa PAO1 | 2.15 | X-RAY DIFFRACTION | 100.0 |
| 8FFB | METAL BINDING PROTEIN | 12/08/22 | Crystal structure of iron bound Dps protein (PA0962) from Pseudomonas aeruginosa (orthorhombic form) | Pseudomonas aeruginosa PAO1 | 2.25 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 381 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000927 (509 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_4075
Search term: putative dna-binding stress protein
|
Human Homologs
References
No references are associated with this feature.