Pseudomonas aeruginosa M18, PAM18_4106 (rumA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_4106
|
| Name |
rumA
|
| Replicon | chromosome |
| Genomic location | 4535172 - 4536524 (- strand) |
Cross-References
| RefSeq | YP_005976689.1 |
| GI | 386060167 |
| Entrez | 12568162 |
| NCBI Locus Tag | PAM18_4106 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
23S rRNA 5-methyluridine methyltransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.22 |
| Kyte-Doolittle Hydrophobicity Value | -0.150 |
| Molecular Weight (kDa) | 49.1 |
| Isoelectric Point (pI) | 7.84 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 551 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000899 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_4106
Search term: rumA
Search term: 23S rRNA 5-methyluridine methyltransferase
|
Human Homologs
References
No references are associated with this feature.