Pseudomonas aeruginosa M18, PAM18_4108 (pirA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_4108
|
| Name |
pirA
|
| Replicon | chromosome |
| Genomic location | 4537682 - 4539910 (- strand) |
Cross-References
| RefSeq | YP_005976691.1 |
| GI | 386060169 |
| Entrez | 12568164 |
| NCBI Locus Tag | PAM18_4108 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
outer membrane receptor FepA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -9.34 |
| Kyte-Doolittle Hydrophobicity Value | -0.557 |
| Molecular Weight (kDa) | 81.0 |
| Isoelectric Point (pI) | 5.29 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5FP2 | METAL TRANSPORT | 11/27/15 | Crystal structure of the siderophore receptor PirA from Pseudomonas aeruginosa | PSEUDOMONAS AERUGINOSA | 2.97 | X-RAY DIFFRACTION | 99.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 340 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000897 (3061 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_4108
Search term: pirA
Search term: outer membrane receptor FepA
|
Human Homologs
References
No references are associated with this feature.