Pseudomonas aeruginosa M18, PAM18_4547
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_4547
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5027714 - 5028523 (- strand) |
Cross-References
| RefSeq | YP_005977130.1 |
| GI | 386060608 |
| Entrez | 12568615 |
| NCBI Locus Tag | PAM18_4547 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative ATP-binding component of ABC transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.07 |
| Kyte-Doolittle Hydrophobicity Value | 0.018 |
| Molecular Weight (kDa) | 29.6 |
| Isoelectric Point (pI) | 6.96 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 7CHA | MEMBRANE PROTEIN | 07/05/20 | Cryo-EM structure of P.aeruginosa MlaFEBD with AMPPNP | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); Pseudomonas aeruginosa PAO1 | 3.9 | ELECTRON MICROSCOPY | 100.0 |
| 7CH9 | MEMBRANE PROTEIN | 07/05/20 | Cryo-EM structure of P.aeruginosa MlaFEBD | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 3.5 | ELECTRON MICROSCOPY | 100.0 |
| 7CH8 | MEMBRANE PROTEIN | 07/05/20 | Cryo-EM structure of P.aeruginosa MlaFEBD with ADP-V | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 3.9 | ELECTRON MICROSCOPY | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004045 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_4547
Search term: putative ATP-binding component of ABC transporter
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value:
8.7e-19
Percent Identity:
30.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value:
8.7e-19
Percent Identity:
30.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value:
8.7e-19
Percent Identity:
30.4
|
References
No references are associated with this feature.