Pseudomonas aeruginosa M18, PAM18_4782
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_4782
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5298381 - 5299028 (- strand) |
Cross-References
| RefSeq | YP_005977364.1 |
| GI | 386060842 |
| Entrez | 12568857 |
| NCBI Locus Tag | PAM18_4782 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative carbonic anhydrase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.06 |
| Kyte-Doolittle Hydrophobicity Value | -0.149 |
| Molecular Weight (kDa) | 24.2 |
| Isoelectric Point (pI) | 6.01 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5BQ1 | LYASE | 05/28/15 | Capturing Carbon Dioxide in beta Carbonic Anhydrase | Pseudomonas aeruginosa | 1.6 | X-RAY DIFFRACTION | 100.0 |
| 6D2J | LYASE | 04/13/18 | Beta Carbonic anhydrase in complex with thiocyanate | Pseudomonas aeruginosa | 2.1 | X-RAY DIFFRACTION | 100.0 |
| 6D2O | LYASE | 04/13/18 | Beta Carbonic anhydrase in complex with 4-methylimidazole | Pseudomonas aeruginosa | 1.9 | X-RAY DIFFRACTION | 100.0 |
| 6D2N | LYASE | 04/13/18 | Beta Carbonic anhydrase in complex with a sulfonamide anion | Pseudomonas aeruginosa | 1.9 | X-RAY DIFFRACTION | 100.0 |
| 6D2M | LYASE | 04/13/18 | Beta Carbonic anhydrase in complex with thiocyanate | Pseudomonas aeruginosa | 1.9 | X-RAY DIFFRACTION | 100.0 |
| 4RXY | LYASE | 12/12/14 | Crystal Structure of the Beta Carbonic Anhydrase psCA3 isolated from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.901 | X-RAY DIFFRACTION | 100.0 |
| 5JJ8 | LYASE | 04/22/16 | Crystal Structure of the Beta Carbonic Anhydrase psCA3 isolated from Pseudomonas aeruginosa - alternate crystal packing form | Pseudomonas aeruginosa | 2.585 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 387 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004326 (477 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_4782
Search term: putative carbonic anhydrase
|
Human Homologs
References
No references are associated with this feature.