Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
Locus Tag |
PAM18_5009
|
Name |
opdK
|
Replicon | chromosome |
Genomic location | 5545580 - 5546833 (- strand) |
RefSeq | YP_005977591.1 |
GI | 386061069 |
Entrez | 12569093 |
NCBI Locus Tag | PAM18_5009 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
histidine porin OpdK
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 1.90 |
Kyte-Doolittle Hydrophobicity Value | -0.372 |
Molecular Weight (kDa) | 45.8 |
Isoelectric Point (pI) | 7.79 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
2Y2X | MEMBRANE PROTEIN | 12/16/10 | Crystal Structure of Pseudomonas Aeruginosa OpdK with Vanillate | PSEUDOMONAS AERUGINOSA PA01 | 1.65 | X-RAY DIFFRACTION | 99.7 |
3SYS | MEMBRANE PROTEIN | 07/18/11 | Improved crystal structure of Pseudomonas aeruginosa OccK1 (OpdK) | Pseudomonas aeruginosa | 1.65 | X-RAY DIFFRACTION | 99.7 |
2QTK | MEMBRANE PROTEIN | 08/02/07 | Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 2.8 | X-RAY DIFFRACTION | 99.7 |
Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.
Drug Name | Source Accession | Source DB | Version | Target Accession | Target Description | Percent Identity | Alignment Length | E-Value |
(Hydroxyethyloxy)Tri(Ethyloxy)Octane | DB04233 | DrugBank | 5.1.4 | Q9HUR5 | Vanillate porin OpdK | 99.8 | 417 | 1.8e-244 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 20 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000239 (1158 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_5009
Search term: opdK
Search term: histidine porin OpdK
|