Pseudomonas aeruginosa M18, PAM18_5637 (pdxY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa M18
GCF_000226155.1|latest
Locus Tag
PAM18_5637
Name
pdxY
Replicon chromosome
Genomic location 6263530 - 6264402 (+ strand)

Cross-References

RefSeq YP_005978216.1
GI 386061694
Entrez 12569736
NCBI Locus Tag PAM18_5637

Product

Feature Type CDS
Coding Frame 1
Product Name
pyridoxamine kinase
Synonyms
Evidence for Translation
Charge (pH 7) -4.05
Kyte-Doolittle Hydrophobicity Value 0.114
Molecular Weight (kDa) 31.4
Isoelectric Point (pI) 6.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5B6A TRANSFERASE 05/25/16 Structure of Pyridoxal Kinasefrom Pseudomonas Aeruginosa Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) 2 X-RAY DIFFRACTION 98.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 138 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005054 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PAM18_5637
Search term: pdxY

Human Homologs

Ensembl 110, assembly GRCh38.p14
pyridoxal kinase [Source:HGNC Symbol;Acc:HGNC:8819]
E-value: 8.8e-33
Percent Identity: 28.7

References

No references are associated with this feature.