Pseudomonas aeruginosa DK2, PADK2_00625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_00625
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 141058 - 141468 (+ strand) |
Cross-References
| RefSeq | YP_006480122.1 |
| GI | 392981535 |
| Entrez | 13171342 |
| NCBI Locus Tag | PADK2_00625 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hemolysin
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.08 |
| Kyte-Doolittle Hydrophobicity Value | -0.386 |
| Molecular Weight (kDa) | 14.6 |
| Isoelectric Point (pI) | 4.41 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6ZC1 | TOXIN | 06/09/20 | Crystal structure of RahU protein from Pseudomonas aeruginosa | Pseudomonas aeruginosa PAO1 | 1.27 | X-RAY DIFFRACTION | 100.0 |
| 6ZC2 | TOXIN | 06/09/20 | Crystal structure of RahU protein in complex with TRIS molecule | Pseudomonas aeruginosa PAO1 | 1.13 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000120 (301 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_00625
Search term: hemolysin
|
Human Homologs
References
No references are associated with this feature.