Pseudomonas aeruginosa DK2, PADK2_02180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa DK2
GCF_000271365.1|latest
Locus Tag
PADK2_02180
Name
Replicon chromosome
Genomic location 476531 - 477940 (- strand)

Cross-References

RefSeq YP_006480431.1
GI 392981844
EC Number 3.3.1.1
Entrez 13171972
NCBI Locus Tag PADK2_02180

Product

Feature Type CDS
Coding Frame 1
Product Name
S-adenosyl-L-homocysteine hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -7.34
Kyte-Doolittle Hydrophobicity Value -0.184
Molecular Weight (kDa) 51.4
Isoelectric Point (pI) 5.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6F3N HYDROLASE 11/28/17 Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with SAH in the presence of K+ and Zn2+ cations Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.85 X-RAY DIFFRACTION 99.8
6F3O HYDROLASE 11/28/17 Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa complexed with adenine, K+ and Zn2+ cations Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.75 X-RAY DIFFRACTION 99.8
6F3P HYDROLASE 11/28/17 Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa in complex with 3'-deoxyadenosine and K+ cation Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.35 X-RAY DIFFRACTION 99.8
7ZD0 HYDROLASE 03/29/22 Crystal structure of Pseudomonas aeruginosa S-adenosyl-L-homocysteine hydrolase inhibited by Cd2+ ions Pseudomonas aeruginosa PAO1 1.87 X-RAY DIFFRACTION 99.8
7ZD1 HYDROLASE 03/29/22 Crystal structure of Pseudomonas aeruginosa S-adenosyl-L-homocysteine hydrolase inhibited by Hg2+ ions Pseudomonas aeruginosa PAO1 1.56 X-RAY DIFFRACTION 99.8
7ZD4 HYDROLASE 03/29/22 Crystal structure of Pseudomonas aeruginosa S-adenosyl-L-homocysteine hydrolase soaked with Cu+ ions Pseudomonas aeruginosa PAO1 2.14 X-RAY DIFFRACTION 99.8
7ZD2 HYDROLASE 03/29/22 Crystal structure of Pseudomonas aeruginosa S-adenosyl-L-homocysteine hydrolase inhibited by Co2+ ions. Pseudomonas aeruginosa PAO1 2.16 X-RAY DIFFRACTION 99.8
7ZD3 HYDROLASE 03/29/22 Crystal structure of Pseudomonas aeruginosa S-adenosyl-L-homocysteine hydrolase inhibited by Zn2+ ions Pseudomonas aeruginosa PAO1 1.9 X-RAY DIFFRACTION 99.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 500 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000423 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PADK2_02180

Human Homologs

Ensembl 110, assembly GRCh38.p14
adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
E-value: 1.3e-134
Percent Identity: 56.2

References

No references are associated with this feature.