Pseudomonas aeruginosa DK2, PADK2_10115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_10115
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2182961 - 2184091 (+ strand) |
Cross-References
| RefSeq | YP_006482012.1 |
| GI | 392983425 |
| Entrez | 13174217 |
| NCBI Locus Tag | PADK2_10115 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.57 |
| Kyte-Doolittle Hydrophobicity Value | -0.169 |
| Molecular Weight (kDa) | 42.9 |
| Isoelectric Point (pI) | 5.33 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6J7M | TRANSFERASE | 01/18/19 | Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P | Pseudomonas aeruginosa PAO1 | 2.301 | X-RAY DIFFRACTION | 98.7 |
| 6J7L | TRANSFERASE | 01/18/19 | Crystal structure of Pseudomonas aeruginosa Earp in complex with TDP | Pseudomonas aeruginosa PAO1 | 1.851 | X-RAY DIFFRACTION | 98.7 |
| 6J7J | TRANSFERASE | 01/18/19 | Crystal structure of Pseudomonas aeruginosa Earp | Pseudomonas aeruginosa PAO1 | 1.75 | X-RAY DIFFRACTION | 98.7 |
| 6J7K | TRANSFERASE | 01/18/19 | Crystal structure of Pseudomonas aeruginosa Earp in complex with TDP-Rha | Pseudomonas aeruginosa PAO1 | 2.15 | X-RAY DIFFRACTION | 98.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 60 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002716 (532 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_10115
|
Human Homologs
References
No references are associated with this feature.