Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
Locus Tag |
PADK2_12770
|
Name |
|
Replicon | chromosome |
Genomic location | 2703585 - 2705003 (- strand) |
RefSeq | YP_006482537.1 |
GI | 392983950 |
Entrez | 13175391 |
NCBI Locus Tag | PADK2_12770 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
Multidrug efflux outer membrane protein OprN precursor
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -6.52 |
Kyte-Doolittle Hydrophobicity Value | -0.291 |
Molecular Weight (kDa) | 51.2 |
Isoelectric Point (pI) | 5.08 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
OprN | OprN is the outer membrane channel component of the MexEF-OprN multidrug efflux complex. [PMID:10515918] | ARO:3000805 | protein homolog model | Perfect | 877.5 | 100.0 | 3.2.5 |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5NSW | MEMBRANE PROTEIN | 04/27/17 | Xenon for tunnelling analysis of the efflux pump component OprN. | Pseudomonas aeruginosa PAO1 | 2.5 | X-RAY DIFFRACTION | 100.0 |
5AZP | MEMBRANE PROTEIN | 10/21/15 | Crystal structure of a membrane protein from Pseudomonas aeruginosa | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | 1.69 | X-RAY DIFFRACTION | 100.0 |
5IUY | TRANSPORT PROTEIN | 03/18/16 | Structural insights of the outer-membrane channel OprN | Pseudomonas aeruginosa PAO1 | 2.29 | X-RAY DIFFRACTION | 100.0 |
5AZO | MEMBRANE PROTEIN | 10/21/15 | Crystal structure of a membrane protein from Pseudomonas aeruginosa | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | 2.7 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 300 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003062 (529 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_12770
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