Pseudomonas aeruginosa DK2, PADK2_12790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_12790
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2710819 - 2711838 (+ strand) |
Cross-References
| RefSeq | YP_006482541.1 |
| GI | 392983954 |
| Entrez | 13175395 |
| NCBI Locus Tag | PADK2_12790 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
oxidoreductase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.98 |
| Kyte-Doolittle Hydrophobicity Value | 0.045 |
| Molecular Weight (kDa) | 36857.1 |
| Isoelectric Point (pI) | 5.42 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| MexS | MexS is a suppressor of MexT, which is an activator of the multidrug pump MexEF-OprN. Mutations in MexS lead to multidrug resistance. [PMID:11040437, PMID:15687188, PMID:26833155] | ARO:3000813 | protein overexpression model | A166P | Strict | 673.3 | 99.71 | 3.2.5 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 491 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003064 (524 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_12790
Search term: oxidoreductase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
vesicle amine transport 1 [Source:HGNC Symbol;Acc:HGNC:16919]
E-value:
6.0e-25
Percent Identity:
27.4
|
References
No references are associated with this feature.