Pseudomonas aeruginosa DK2, PADK2_13235
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_13235
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2821074 - 2822027 (- strand) |
Cross-References
| RefSeq | YP_006482630.1 |
| GI | 392984043 |
| Entrez | 13175484 |
| NCBI Locus Tag | PADK2_13235 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
adhesion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 6.68 |
| Kyte-Doolittle Hydrophobicity Value | -0.032 |
| Molecular Weight (kDa) | 34.3 |
| Isoelectric Point (pI) | 9.60 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6R3Z | TRANSPORT PROTEIN | 03/21/19 | Structure of the SBP FpvC in complex with Ni2+ ion from P. aeruginosa in P212121 space group | Pseudomonas aeruginosa PAO1 | 1.65 | X-RAY DIFFRACTION | 100.0 |
| 6RU4 | TRANSPORT PROTEIN | 05/27/19 | Structure of the SBP FpvC from pseudomonas aeruginosa in complex with Mn2+ | Pseudomonas aeruginosa PAO1 | 2.49 | X-RAY DIFFRACTION | 100.0 |
| 6R6K | PROTEIN TRANSPORT | 03/27/19 | Structure of a FpvC mutant from pseudomonas aeruginosa | Pseudomonas aeruginosa | 2.1 | X-RAY DIFFRACTION | 97.9 |
| 6R5S | TRANSPORT PROTEIN | 03/25/19 | Structure of the SBP FpvC from pseudomonas aeruginosa in complex with Fe(II) | Pseudomonas aeruginosa | 2.75 | X-RAY DIFFRACTION | 100.0 |
| 6R44 | TRANSPORT PROTEIN | 03/21/19 | Structure of the SBP FpvC in complex with Ni2+ ion from P.aeruginosa from P21 space group | Pseudomonas aeruginosa PAO1 | 1.99 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 474 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003125 (477 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_13235
Search term: adhesion protein
|
Human Homologs
References
No references are associated with this feature.