Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
Locus Tag |
PADK2_16140
|
Name |
|
Replicon | chromosome |
Genomic location | 3498590 - 3499213 (- strand) |
RefSeq | YP_006483209.1 |
GI | 392984622 |
Entrez | 13172223 |
NCBI Locus Tag | PADK2_16140 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
phenazine biosynthesis protein PhzD
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -3.89 |
Kyte-Doolittle Hydrophobicity Value | -0.094 |
Molecular Weight (kDa) | 23.2 |
Isoelectric Point (pI) | 5.63 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
1NF8 | HYDROLASE | 12/13/02 | Crystal structure of PhzD protein active site mutant with substrate | Pseudomonas aeruginosa | 1.6 | X-RAY DIFFRACTION | 99.5 |
1NF9 | HYDROLASE | 12/13/02 | Crystal Structure of PhzD protein from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.5 | X-RAY DIFFRACTION | 100.0 |
Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.
Drug Name | Source Accession | Source DB | Version | Target Accession | Target Description | Percent Identity | Alignment Length | E-Value |
Isochorismic Acid | DB02793 | DrugBank | 5.1.4 | Q7DC80 | Phenazine biosynthesis protein PhzD | 100.0 | 207 | 3.6e-116 |
Formic acid | DB01942 | DrugBank | 5.1.4 | Q7DC80 | Phenazine biosynthesis protein PhzD | 100.0 | 207 | 3.6e-116 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 231 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001494 (1079 members) |
Putative Inparalogs |
1 predicted inparalogs phenazine biosynthesis protein PhzD (PADK2_03605) 100.0% identity |
STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_16140
Search term: phenazine biosynthesis protein PhzD
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