Pseudomonas aeruginosa DK2, PADK2_20745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_20745
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4465618 - 4466631 (- strand) |
Cross-References
| RefSeq | YP_006484120.1 |
| GI | 392985533 |
| EC Number | 2.3.1.180 |
| Entrez | 13175060 |
| NCBI Locus Tag | PADK2_20745 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
3-oxoacyl-ACP synthase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -9.53 |
| Kyte-Doolittle Hydrophobicity Value | 0.072 |
| Molecular Weight (kDa) | 36.4 |
| Isoelectric Point (pI) | 5.34 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3H76 | TRANSFERASE | 04/24/09 | Crystal structure of PqsD, a key enzyme in Pseudomonas aeruginosa quinolone signal biosynthesis pathway | Pseudomonas aeruginosa PAO1 | 1.8 | X-RAY DIFFRACTION | 99.7 |
| 3H77 | TRANSFERASE | 04/24/09 | Crystal structure of Pseudomonas aeruginosa PqsD in a covalent complex with anthranilate | Pseudomonas aeruginosa PAO1 | 1.8 | X-RAY DIFFRACTION | 99.7 |
| 3H78 | TRANSFERASE | 04/24/09 | Crystal structure of Pseudomonas aeruginosa PqsD C112A mutant in complex with anthranilic acid | Pseudomonas aeruginosa PAO1 | 1.7 | X-RAY DIFFRACTION | 99.4 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 586 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000962 (605 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_20745
Search term: 3-oxoacyl-ACP synthase
|
Human Homologs
References
No references are associated with this feature.