Pseudomonas aeruginosa DK2, PADK2_21445
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_21445
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4607794 - 4608963 (+ strand) |
Cross-References
| RefSeq | YP_006484258.1 |
| GI | 392985671 |
| Entrez | 13172723 |
| NCBI Locus Tag | PADK2_21445 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
chitin-binding protein CbpD
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.57 |
| Kyte-Doolittle Hydrophobicity Value | -0.352 |
| Molecular Weight (kDa) | 41.9 |
| Isoelectric Point (pI) | 6.85 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 8C5N | OXIDOREDUCTASE | 01/09/23 | Sub-atomic resolution structure of the chitin-binding protein D (CbpD) from Pseudomonas aeruginosa | Pseudomonas aeruginosa PA14 | 0.75 | X-RAY DIFFRACTION | 100.0 |
| 7SQX | OXIDOREDUCTASE | 11/07/21 | Crystal Structure of Pseudomonas aeruginosa lytic polysaccharide monooxygenase CbpD | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 3 | X-RAY DIFFRACTION | 99.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 75 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000819 (307 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_21445
Search term: chitin-binding protein CbpD
|
Human Homologs
References
No references are associated with this feature.