Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
Locus Tag |
PADK2_24420
|
Name |
|
Replicon | chromosome |
Genomic location | 5251043 - 5252482 (- strand) |
RefSeq | YP_006484849.1 |
GI | 392986262 |
Entrez | 13173886 |
NCBI Locus Tag | PADK2_24420 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
outer membrane protein OprJ
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 5.71 |
Kyte-Doolittle Hydrophobicity Value | -0.240 |
Molecular Weight (kDa) | 51.9 |
Isoelectric Point (pI) | 9.55 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
OprJ | OprJ is the outer membrane channel component of the MexCD-OprJ multidrug efflux complex. [PMID:9449262] | ARO:3000802 | protein homolog model | Strict | 878.6 | 99.16 | 3.2.5 |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5AZS | MEMBRANE PROTEIN | 10/21/15 | Crystal structure of a membrane protein from Pseudomonas aeruginosa | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | 3.1 | X-RAY DIFFRACTION | 99.6 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 293 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004255 (330 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_24420
Search term: outer membrane protein OprJ
|