Pseudomonas aeruginosa DK2, PADK2_27510
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_27510
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5950021 - 5950944 (+ strand) |
Cross-References
| RefSeq | YP_006485465.1 |
| GI | 392986878 |
| Entrez | 13170879 |
| NCBI Locus Tag | PADK2_27510 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
LD-carboxypeptidase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.55 |
| Kyte-Doolittle Hydrophobicity Value | -0.034 |
| Molecular Weight (kDa) | 33.3 |
| Isoelectric Point (pI) | 6.92 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 2AUM | HYDROLASE | 08/28/05 | Active site Ser115Ala mutant of LD-carboxypeptidase | Pseudomonas aeruginosa | 2.4 | X-RAY DIFFRACTION | 98.7 |
| 2AUN | HYDROLASE | 08/28/05 | Active site His285Ala mutant of LD-carboxypeptidase | Pseudomonas aeruginosa | 2.4 | X-RAY DIFFRACTION | 98.7 |
| 1ZRS | HYDROLASE | 05/21/05 | wild-type LD-carboxypeptidase | Pseudomonas aeruginosa | 1.5 | X-RAY DIFFRACTION | 99.0 |
| 1ZL0 | STRUCTURAL GENOMICS, UNKNOWN FUNCTION | 05/04/05 | Structure of Protein of Unknown Function PA5198 from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.1 | X-RAY DIFFRACTION | 99.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 266 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004782 (372 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_27510
Search term: LD-carboxypeptidase
|
Human Homologs
References
No references are associated with this feature.