Pseudomonas aeruginosa RP73, M062_21515
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa RP73
GCF_000414035.1|latest |
| Locus Tag |
M062_21515
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4623811 - 4624500 (+ strand) |
Cross-References
| RefSeq | YP_008134710.1 |
| GI | 514411256 |
| Entrez | 15962041 |
| NCBI Locus Tag | M062_21515 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
short-chain dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.34 |
| Kyte-Doolittle Hydrophobicity Value | 0.081 |
| Molecular Weight (kDa) | 24.3 |
| Isoelectric Point (pI) | 5.06 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5WQN | OXIDOREDUCTASE | 11/27/16 | Crystal structure of a carbonyl reductase from Pseudomonas aeruginosa PAO1 (condition II) | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 2 | X-RAY DIFFRACTION | 100.0 |
| 5WQO | OXIDOREDUCTASE | 11/27/16 | Crystal structure of a carbonyl reductase from Pseudomonas aeruginosa PAO1 in complex with NADP (condition I) | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.78 | X-RAY DIFFRACTION | 100.0 |
| 5WQM | OXIDOREDUCTASE | 11/27/16 | Crystal structure of a carbonyl reductase from Pseudomonas aeruginosa PAO1 (condition I) | Pseudomonas aeruginosa PAO1 | 2.6 | X-RAY DIFFRACTION | 100.0 |
| 5WQP | OXIDOREDUCTASE | 11/27/16 | Crystal structure of a carbonyl reductase from Pseudomonas aeruginosa PAO1 in complex with NADP (condition II) | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.7 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 508 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001607 (450 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: M062_21515
Search term: short-chain dehydrogenase
|
Human Homologs
References
No references are associated with this feature.