Pseudomonas aeruginosa RP73, M062_23010
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa RP73
GCF_000414035.1|latest |
| Locus Tag |
M062_23010
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4959201 - 4959782 (+ strand) |
Cross-References
| RefSeq | YP_008135000.1 |
| GI | 514411520 |
| Entrez | 15962340 |
| NCBI Locus Tag | M062_23010 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
superoxide dismutase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.39 |
| Kyte-Doolittle Hydrophobicity Value | -0.288 |
| Molecular Weight (kDa) | 21.4 |
| Isoelectric Point (pI) | 5.21 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 1DT0 | OXIDOREDUCTASE | 01/10/00 | CLONING, SEQUENCE, AND CRYSTALLOGRAPHIC STRUCTURE OF RECOMBINANT IRON SUPEROXIDE DISMUTASE FROM PSEUDOMONAS OVALIS | Pseudomonas putida | 2.1 | X-RAY DIFFRACTION | 92.1 |
| 3SDP | OXIDOREDUCTASE (SUPEROXIDE ACCEPTOR) | 05/06/91 | THE 2.1 ANGSTROMS RESOLUTION STRUCTURE OF IRON SUPEROXIDE DISMUTASE FROM PSEUDOMONAS OVALIS | Pseudomonas putida | 2.1 | X-RAY DIFFRACTION | 91.5 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 530 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003959 (531 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: M062_23010
Search term: superoxide dismutase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]
E-value:
3.3e-44
Percent Identity:
47.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]
E-value:
3.3e-44
Percent Identity:
47.0
|
References
No references are associated with this feature.