Pseudomonas aeruginosa RP73, M062_25165
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa RP73
GCF_000414035.1|latest |
| Locus Tag |
M062_25165
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5426993 - 5428120 (+ strand) |
Cross-References
| RefSeq | YP_008135415.1 |
| GI | 514411908 |
| Entrez | 15962770 |
| NCBI Locus Tag | M062_25165 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
spermidine synthase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -26.19 |
| Kyte-Doolittle Hydrophobicity Value | -0.209 |
| Molecular Weight (kDa) | 42.3 |
| Isoelectric Point (pI) | 4.40 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 350 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003702 (713 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: M062_25165
Search term: spermidine synthase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
E-value:
4.3e-32
Percent Identity:
30.0
|
References
No references are associated with this feature.