Pseudomonas aeruginosa RP73, M062_26080 (miaA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa RP73
GCF_000414035.1|latest
Locus Tag
M062_26080
Name
miaA
Replicon chromosome
Genomic location 5619555 - 5620526 (- strand)

Cross-References

RefSeq YP_008135594.1
GI 514412070
EC Number 2.5.1.75
Entrez 15962953
NCBI Locus Tag M062_26080

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA delta(2)-isopentenylpyrophosphate transferase
Synonyms
Evidence for Translation
Charge (pH 7) -1.10
Kyte-Doolittle Hydrophobicity Value -0.186
Molecular Weight (kDa) 35.8
Isoelectric Point (pI) 6.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3CRM TRANSFERASE 04/07/08 Structure of tRNA Dimethylallyltransferase: RNA Modification through a Channel Pseudomonas aeruginosa 1.9 X-RAY DIFFRACTION 99.1
3CRR TRANSFERASE 04/07/08 Structure of tRNA Dimethylallyltransferase: RNA Modification through a Channel Pseudomonas aeruginosa 1.9 X-RAY DIFFRACTION 99.1
3CRQ TRANSFERASE 04/07/08 Structure of tRNA Dimethylallyltransferase: RNA Modification through a Channel Pseudomonas aeruginosa 2.2 X-RAY DIFFRACTION 99.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 584 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004560 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: M062_26080
Search term: miaA

Human Homologs

Ensembl 110, assembly GRCh38.p14
tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
E-value: 3.8e-29
Percent Identity: 29.8
Ensembl 110, assembly GRCh38.p14
tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
E-value: 3.8e-29
Percent Identity: 29.8

References

No references are associated with this feature.