Pseudomonas aeruginosa RP73, M062_28145
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa RP73
GCF_000414035.1|latest |
| Locus Tag |
M062_28145
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 6088515 - 6089447 (+ strand) |
Cross-References
| RefSeq | YP_008136003.1 |
| GI | 514412449 |
| Entrez | 15963366 |
| NCBI Locus Tag | M062_28145 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
LysR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -1.47 |
| Kyte-Doolittle Hydrophobicity Value | -0.023 |
| Molecular Weight (kDa) | 34.3 |
| Isoelectric Point (pI) | 6.74 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4X6G | DNA BINDING PROTEIN | 12/08/14 | Full-length OxyR C199D from pseudomonas aeruginosa | Pseudomonas aeruginosa PAO1 | 2 | X-RAY DIFFRACTION | 99.7 |
| 4Y0M | DNA BINDING PROTEIN | 02/06/15 | The reduced form of OxyR regulatory domain from Psedomonas aeruginosa | Pseudomonas aeruginosa PAO1 | 2.3 | X-RAY DIFFRACTION | 100.0 |
| 4XWS | DNA BINDING PROTEIN | 01/29/15 | OxyR regulatory domain C199D mutant from pseudomonas aeruginosa | Pseudomonas aeruginosa PAO1 | 3.006 | X-RAY DIFFRACTION | 99.6 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 540 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004912 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: M062_28145
Search term: LysR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.