Pseudomonas entomophila L48, PSEEN0303 (rpoH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas entomophila L48
GCF_000026105.1|latest
Locus Tag
PSEEN0303
Name
rpoH
Replicon chromosome
Genomic location 318176 - 319030 (+ strand)

Cross-References

RefSeq YP_606082.1
GI 104779584
Entrez 4090247
INSDC CAK13265.1
UniParc UPI0000D77FA4
UniProtKB Acc Q1IGD7
UniProtKB ID Q1IGD7_PSEE4
UniRef100 UniRef100_Q1IGD7
UniRef50 UniRef50_P11539
UniRef90 UniRef90_Q88AG0

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase factor sigma-32
Synonyms
Evidence for Translation
Charge (pH 7) -5.59
Kyte-Doolittle Hydrophobicity Value -0.468
Molecular Weight (kDa) 32602.6
Isoelectric Point (pI) 6.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000367 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEEN0303
Search term: rpoH

Human Homologs

References

No references are associated with this feature.