Pseudomonas entomophila L48, PSEEN4113 (rimO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas entomophila L48
GCF_000026105.1|latest
Locus Tag
PSEEN4113
Name
rimO
Replicon chromosome
Genomic location 4409558 - 4410889 (+ strand)

Cross-References

RefSeq YP_609588.1
GI 104783090
Entrez 4089934
INSDC CAK16804.1
UniParc UPI0000D78D2E
UniProtKB Acc Q1I6D1
UniProtKB ID RIMO_PSEE4
UniRef100 UniRef100_Q1I6D1
UniRef50 UniRef50_A8AIT5
UniRef90 UniRef90_A5VZS9

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal protein S12 methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -20.11
Kyte-Doolittle Hydrophobicity Value -0.200
Molecular Weight (kDa) 49408.0
Isoelectric Point (pI) 4.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000882 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEEN4113
Search term: rimO

Human Homologs

References

No references are associated with this feature.