Pseudomonas entomophila L48, PSEEN5161 (soxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas entomophila L48
GCF_000026105.1|latest
Locus Tag
PSEEN5161
Name
soxB
Replicon chromosome
Genomic location 5486516 - 5487766 (- strand)

Cross-References

RefSeq YP_610572.1
GI 104784074
EC Number 1.5.3.1
Entrez 4087065
INSDC CAK17789.1
UniParc UPI0000D790FF
UniProtKB Acc Q1I3J7
UniProtKB ID Q1I3J7_PSEE4
UniRef100 UniRef100_Q1I3J7
UniRef50 UniRef50_O87388
UniRef90 UniRef90_Q9HTE8

Product

Feature Type CDS
Coding Frame 1
Product Name
sarcosine oxidase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) 7.72
Kyte-Doolittle Hydrophobicity Value -0.162
Molecular Weight (kDa) 45.3
Isoelectric Point (pI) 8.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 293 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004970 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEEN5161
Search term: soxB

Human Homologs

References

No references are associated with this feature.