Pseudomonas entomophila L48, PSEEN5555 (trmE)

Gene Feature Overview

Strain	Pseudomonas entomophila L48 GCF_000026105.1|latest
Locus Tag	PSEEN5555
Name	trmE
Replicon	chromosome
Genomic location	5884816 - 5886186 (- strand)

Cross-References

RefSeq	YP_610944.1
GI	104784446
Entrez	4087197
INSDC	CAK18161.1
UniParc	UPI0000D7926E
UniProtKB Acc	Q1I2H5
UniProtKB ID	MNME_PSEE4
UniRef100	UniRef100_Q1I2H5
UniRef50	UniRef50_Q9CLQ1
UniRef90	UniRef90_Q1I2H5

Product

Feature Type	CDS
Coding Frame	1
Product Name	tRNA modification GTPase TrmE
Synonyms
Evidence for Translation
Charge (pH 7)	-19.48
Kyte-Doolittle Hydrophobicity Value	-0.116
Molecular Weight (kDa)	49059.8
Isoelectric Point (pI)	4.86

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 607 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005098 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEEN5555 Search term: trmE Search term: tRNA modification GTPase TrmE

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000313818 GTP binding protein 3, mitochondrial [Source:HGNC Symbol;Acc:HGNC:14880] E-value: 8.6e-59 Percent Identity: 37.6
Ensembl 110, assembly GRCh38.p14	ENSP00000354598 GTP binding protein 3, mitochondrial [Source:HGNC Symbol;Acc:HGNC:14880] E-value: 8.6e-59 Percent Identity: 37.6

References