Pseudomonas stutzeri A1501, PST_0832 (ligT)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri A1501
GCF_000013785.1|latest |
| Locus Tag |
PST_0832
|
| Name |
ligT
|
| Replicon | chromosome |
| Genomic location | 926927 - 927448 (- strand) |
Cross-References
| RefSeq | YP_001171371.1 |
| GI | 146281218 |
| Entrez | 5098502 |
| NCBI Locus Tag | PST_0832 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
2'-5' RNA ligase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.10 |
| Kyte-Doolittle Hydrophobicity Value | 0.096 |
| Molecular Weight (kDa) | 18575.1 |
| Isoelectric Point (pI) | 7.56 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 131 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG024993 (9 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PST_0832
Search term: ligT
Search term: 2'-5' RNA ligase
|
Human Homologs
References
No references are associated with this feature.