Pseudomonas stutzeri A1501, PST_1556 (kdsA)

Gene Feature Overview

Strain	Pseudomonas stutzeri A1501 GCF_000013785.1|latest
Locus Tag	PST_1556
Name	kdsA
Replicon	chromosome
Genomic location	1672245 - 1673090 (+ strand)

Cross-References

RefSeq	YP_001172083.1
GI	146281930
EC Number	2.5.1.55
Entrez	5097641
INSDC	ABP79241.1
NCBI Locus Tag	PST_1556
UniParc	UPI00014FF2ED
UniProtKB Acc	A4VJU0
UniProtKB ID	KDSA_PSEU5
UniRef100	UniRef100_A4VJU0
UniRef50	UniRef50_Q88LX0
UniRef90	UniRef90_C1DSS7

Product

Feature Type	CDS
Coding Frame	1
Product Name	2-dehydro-3-deoxyphosphooctonate aldolase
Synonyms
Evidence for Translation
Charge (pH 7)	-1.22
Kyte-Doolittle Hydrophobicity Value	-0.079
Molecular Weight (kDa)	30.9
Isoelectric Point (pI)	6.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
4LU0	TRANSFERASE	07/24/13	Crystal structure of 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase from Pseudomonas aeruginosa.	Pseudomonas aeruginosa	2.8	X-RAY DIFFRACTION	90.7

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 504 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002038 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PST_1556 Search term: kdsA Search term: 2-dehydro-3-deoxyphosphooctonate aldolase

Human Homologs

References