Pseudomonas stutzeri A1501, PST_1747 (rimO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_1747
Name
rimO
Replicon chromosome
Genomic location 1883925 - 1885307 (- strand)

Cross-References

RefSeq YP_001172267.1
GI 146282114
Entrez 5097831
INSDC ABP79425.1
NCBI Locus Tag PST_1747
UniParc UPI0001A3370B
UniProtKB Acc A4VKC4
UniProtKB ID RIMO_PSEU5
UniRef100 UniRef100_A4VKC4
UniRef50 UniRef50_A8AIT5
UniRef90 UniRef90_A4VKC4

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal protein S12 methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -17.33
Kyte-Doolittle Hydrophobicity Value -0.146
Molecular Weight (kDa) 51271.4
Isoelectric Point (pI) 4.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000882 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_1747
Search term: rimO

Human Homologs

References

No references are associated with this feature.