Pseudomonas stutzeri A1501, PST_2555 (ccmA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_2555
Name
ccmA
Replicon chromosome
Genomic location 2780177 - 2780812 (- strand)

Cross-References

RefSeq YP_001173047.1
GI 146282894
Entrez 5095517
INSDC ABP80205.1
NCBI Locus Tag PST_2555
UniParc UPI00014FEA2B
UniProtKB Acc A4VMK4
UniProtKB ID A4VMK4_PSEU5
UniRef100 UniRef100_A4VMK4
UniRef50 UniRef50_Q9KQE3
UniRef90 UniRef90_A4VMK4

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c biogenesis protein CcmA
Synonyms
Evidence for Translation
Charge (pH 7) -1.20
Kyte-Doolittle Hydrophobicity Value -0.130
Molecular Weight (kDa) 23.2
Isoelectric Point (pI) 6.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001390 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_2555
Search term: ccmA

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 6 [Source:HGNC Symbol;Acc:HGNC:36]
E-value: 4.2e-16
Percent Identity: 33.0

References

No references are associated with this feature.