Pseudomonas stutzeri A1501, PST_2888

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_2888
Name
Replicon chromosome
Genomic location 3108550 - 3110355 (- strand)

Cross-References

RefSeq YP_001173376.1
GI 146283223
Entrez 5095850
INSDC ABP80534.1
NCBI Locus Tag PST_2888
UniParc UPI00014FE968
UniProtKB Acc A4VNI3
UniProtKB ID A4VNI3_PSEU5
UniRef100 UniRef100_A4VNI3
UniRef50 UniRef50_D4XH15
UniRef90 UniRef90_A4VNI3

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein/permease
Synonyms
Evidence for Translation
Charge (pH 7) -1.52
Kyte-Doolittle Hydrophobicity Value 0.155
Molecular Weight (kDa) 65.5
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001073 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_2888

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 6.4e-62
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 8 [Source:HGNC Symbol;Acc:HGNC:49]
E-value: 6.4e-62
Percent Identity: 32.3
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 6.4e-62
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 8 [Source:HGNC Symbol;Acc:HGNC:49]
E-value: 6.4e-62
Percent Identity: 32.3
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 6.4e-62
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 6.4e-62
Percent Identity: 32.6

References

No references are associated with this feature.