Pseudomonas stutzeri A1501, PST_3277

Gene Feature Overview

Strain	Pseudomonas stutzeri A1501 GCF_000013785.1|latest
Locus Tag	PST_3277
Name
Replicon	chromosome
Genomic location	3543975 - 3544988 (+ strand)

Cross-References

RefSeq	YP_001173750.1
GI	146283597
Entrez	5096238
INSDC	ABP80908.1
NCBI Locus Tag	PST_3277
UniParc	UPI00014FEE10
UniProtKB Acc	A4VPK7
UniProtKB ID	A4VPK7_PSEU5
UniRef100	UniRef100_A4VPK7
UniRef50	UniRef50_Q9HUW1
UniRef90	UniRef90_A0A098FYS3

Product

Feature Type	CDS
Coding Frame	1
Product Name	NifR3 family TIM-barrel protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.84
Kyte-Doolittle Hydrophobicity Value	-0.168
Molecular Weight (kDa)	36.7
Isoelectric Point (pI)	7.67

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 562 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004481 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PST_3277 Search term: NifR3 family TIM-barrel protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000315558 dihydrouridine synthase 3 like [Source:HGNC Symbol;Acc:HGNC:26920] E-value: 2.9e-27 Percent Identity: 33.6
Ensembl 110, assembly GRCh38.p14	ENSP00000311977 dihydrouridine synthase 3 like [Source:HGNC Symbol;Acc:HGNC:26920] E-value: 2.9e-27 Percent Identity: 33.6

References