Pseudomonas stutzeri A1501, PST_4210 (trmE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri A1501
GCF_000013785.1|latest |
| Locus Tag |
PST_4210
|
| Name |
trmE
|
| Replicon | chromosome |
| Genomic location | 4563480 - 4564847 (- strand) |
Cross-References
| RefSeq | YP_001174674.1 |
| GI | 146284521 |
| Entrez | 5097169 |
| NCBI Locus Tag | PST_4210 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
tRNA modification GTPase TrmE
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -20.27 |
| Kyte-Doolittle Hydrophobicity Value | -0.059 |
| Molecular Weight (kDa) | 48940.8 |
| Isoelectric Point (pI) | 4.87 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 606 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG005098 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PST_4210
Search term: trmE
Search term: tRNA modification GTPase TrmE
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
GTP binding protein 3, mitochondrial [Source:HGNC Symbol;Acc:HGNC:14880]
E-value:
9.2e-61
Percent Identity:
37.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
GTP binding protein 3, mitochondrial [Source:HGNC Symbol;Acc:HGNC:14880]
E-value:
9.2e-61
Percent Identity:
37.8
|
References
No references are associated with this feature.