Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_0270 (ldhA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_0270
Name
ldhA
Replicon chromosome
Genomic location 304230 - 305219 (- strand)

Cross-References

RefSeq YP_004712640.1
GI 339492347
Entrez 10941313
NCBI Locus Tag PSTAB_0270

Product

Feature Type CDS
Coding Frame 1
Product Name
D-lactate dehydrogenase (fermentative)
Synonyms
Evidence for Translation
Charge (pH 7) -7.72
Kyte-Doolittle Hydrophobicity Value 0.105
Molecular Weight (kDa) 35493.2
Isoelectric Point (pI) 5.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
vanH gene in vanD cluster Also known as vanHD, is a vanH variant in the vanD gene cluster. [PMID:12499162, PMID:16323116] ARO:3002944 protein homolog model Strict 200.7 37.82 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000893 (1006 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_0270
Search term: ldhA

Human Homologs

References

No references are associated with this feature.