Strain |
Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest |
Locus Tag |
PSTAB_0668
|
Name |
tuf
|
Replicon | chromosome |
Genomic location | 744133 - 745326 (+ strand) |
RefSeq | YP_004713038.1 |
GI | 339492745 |
Entrez | 10941711 |
NCBI Locus Tag | PSTAB_0668 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
elongation factor Tu
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -11.75 |
Kyte-Doolittle Hydrophobicity Value | -0.178 |
Molecular Weight (kDa) | 43.5 |
Isoelectric Point (pI) | 5.14 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4ZV4 | TRANSLATION | 05/18/15 | Structure of Tse6 in complex with EF-Tu | Pseudomonas aeruginosa; Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | 3.504 | X-RAY DIFFRACTION | 90.9 |
4IW3 | METAL BINDING PROTEIN/TRANSLATION | 01/23/13 | Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) in complex with elongation factor Tu (EF-Tu) | Pseudomonas putida | 2.697 | X-RAY DIFFRACTION | 91.9 |
4J0Q | TRANSLATION | 01/31/13 | Crystal structure of Pseudomonas putida elongation factor Tu (EF-Tu) | Pseudomonas putida | 2.294 | X-RAY DIFFRACTION | 91.9 |
Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.
Drug Name | Source Accession | Source DB | Version | Target Accession | Target Description | Percent Identity | Alignment Length | E-Value |
Guanosine-5'-Diphosphate | DB04315 | DrugBank | 5.1.4 | Q01698 | Elongation factor Tu | 72.2 | 406 | 1.5e-163 |
2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE | DB08185 | DrugBank | 5.1.4 | Q01698 | Elongation factor Tu | 72.2 | 406 | 1.5e-163 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001434 (870 members) |
Putative Inparalogs |
1 predicted inparalogs elongation factor Tu (PSTAB_0656) 100.0% identity |
STRING database | Search for predicted protein-protein interactions using:
Search term: PSTAB_0668
Search term: tuf
Search term: elongation factor Tu
|
Ensembl
110, assembly
GRCh38.p14
|
Tu translation elongation factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12420]
E-value:
3.9e-132
Percent Identity:
56.3
|