Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_0670 (rplC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_0670
Name
rplC
Replicon chromosome
Genomic location 745904 - 746506 (+ strand)

Cross-References

RefSeq YP_004713040.1
GI 339492747
Entrez 10941713
INSDC AEJ03951.1
NCBI Locus Tag PSTAB_0670
UniParc UPI000215DAD3
UniProtKB Acc F8H9T6
UniProtKB ID F8H9T6_PSEUT
UniRef100 UniRef100_A4VHN0
UniRef50 UniRef50_A2SLF7
UniRef90 UniRef90_Q889X1

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L3
Synonyms
Evidence for Translation
Charge (pH 7) 7.93
Kyte-Doolittle Hydrophobicity Value -0.398
Molecular Weight (kDa) 21632.4
Isoelectric Point (pI) 10.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001447 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_0670
Search term: rplC

Human Homologs

Ensembl 110, assembly GRCh38.p14
mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10379]
E-value: 1.1e-21
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10379]
E-value: 1.1e-21
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10379]
E-value: 1.1e-21
Percent Identity: 32.6

References

No references are associated with this feature.