Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_0749

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_0749
Name
Replicon chromosome
Genomic location 807286 - 808170 (+ strand)

Cross-References

RefSeq YP_004713119.1
GI 339492826
Entrez 10941792
NCBI Locus Tag PSTAB_0749

Product

Feature Type CDS
Coding Frame 1
Product Name
pseudouridylate synthase, 23S RNA-specific
Synonyms
Evidence for Translation
Charge (pH 7) -1.50
Kyte-Doolittle Hydrophobicity Value -0.402
Molecular Weight (kDa) 33959.5
Isoelectric Point (pI) 6.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 547 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003402 (526 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_0749

Human Homologs

Ensembl 110, assembly GRCh38.p14
RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
E-value: 8.9e-17
Percent Identity: 31.1
Ensembl 110, assembly GRCh38.p14
RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
E-value: 8.9e-17
Percent Identity: 31.1

References

No references are associated with this feature.