Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_1852

Gene Feature Overview

Strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1 GCF_000219605.1|latest
Locus Tag	PSTAB_1852
Name
Replicon	chromosome
Genomic location	1960239 - 1960997 (- strand)

Cross-References

RefSeq	YP_004714222.1
GI	339493929
Entrez	10942895
INSDC	AEJ05133.1
NCBI Locus Tag	PSTAB_1852
UniParc	UPI000215DA54
UniProtKB Acc	F8H8W0
UniProtKB ID	F8H8W0_PSEUT
UniRef100	UniRef100_F8H8W0
UniRef50	UniRef50_Q607X6
UniRef90	UniRef90_A4VKX9

Product

Feature Type	CDS
Coding Frame	1
Product Name	cobalamin biosynthetic protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.73
Kyte-Doolittle Hydrophobicity Value	-0.088
Molecular Weight (kDa)	27130.7
Isoelectric Point (pI)	7.14

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 447 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001085 (446 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAB_1852 Search term: cobalamin biosynthetic protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000505469 sirtuin 5 [Source:HGNC Symbol;Acc:HGNC:14933] E-value: 4.2e-39 Percent Identity: 38.1
Ensembl 110, assembly GRCh38.p14	ENSP00000368564 sirtuin 5 [Source:HGNC Symbol;Acc:HGNC:14933] E-value: 4.2e-39 Percent Identity: 38.1

References