Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_2623 (lolD)

Gene Feature Overview

Strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1 GCF_000219605.1|latest
Locus Tag	PSTAB_2623
Name	lolD
Replicon	chromosome
Genomic location	2815733 - 2816431 (- strand)

Cross-References

RefSeq	YP_004714993.1
GI	339494700
Entrez	10943666
INSDC	AEJ05904.1
NCBI Locus Tag	PSTAB_2623
UniParc	UPI0002046ED1
UniProtKB Acc	F8H3V5
UniProtKB ID	F8H3V5_PSEUT
UniRef100	UniRef100_F2N4Z5
UniRef50	UniRef50_Q48KI4
UniRef90	UniRef90_L0GHJ8

Product

Feature Type	CDS
Coding Frame	1
Product Name	lipoprotein releasing system, ATP-binding protein LolD
Synonyms
Evidence for Translation
Charge (pH 7)	-4.13
Kyte-Doolittle Hydrophobicity Value	-0.130
Molecular Weight (kDa)	25.3
Isoelectric Point (pI)	6.09

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002595 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAB_2623 Search term: lolD Search term: lipoprotein releasing system, ATP-binding protein LolD

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000499543 ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48] E-value: 8.9e-20 Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14	ENSP00000253577 ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48] E-value: 8.9e-20 Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14	ENSP00000343849 ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48] E-value: 8.9e-20 Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14	ENSP00000284425 ATP binding cassette subfamily A member 6 [Source:HGNC Symbol;Acc:HGNC:36] E-value: 8.9e-20 Percent Identity: 30.0
Ensembl 110, assembly GRCh38.p14	ENSP00000479985 ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48] E-value: 8.9e-20 Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14	ENSP00000496526 ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48] E-value: 8.9e-20 Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14	ENSP00000362492 ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48] E-value: 8.9e-20 Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14	ENSP00000436586 ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48] E-value: 8.9e-20 Percent Identity: 31.7

References